BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H11SP1|AL427404
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig909 1884 0.0
>3x_Contig909
Length = 3333
Score = 1884 bits (948), Expect = 0.0
Identities = 994/1004 (99%), Gaps = 6/1004 (0%)
Strand = Plus / Plus
Query: 1 agaaacaaatattvtccttactaaagtaacagaacagaacagaataatgatggtttgaca 60
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1624 agaaacaaatattatccttactaaagtaacagaacagaacagaataatgatggttt-aca 1682
Query: 61 aatccaatctttcatataacgaactaaaggagaaaactgggagcatacagtagttagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 aatccaatctttcatataacgaactaaaggagaaaactgggagcatacagtagttagtac 1742
Query: 121 atagcaacacgcacacacactcgcatatatacacttctctgtctcaactgatcgattgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 atagcaacacgcacacacactcgcatatatacacttctctgtctcaactgatcgattgtc 1802
Query: 181 gaaaaagtataaaagaagcacggtcaccacactctttcagaaaagttccctcggacaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 gaaaaagtataaaagaagcacggtcaccacactctttcagaaaagttccctcggacaata 1862
Query: 241 atcctctcatcggatcaaactatccatctctataccaaacaaacatcaacaggtaaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 atcctctcatcggatcaaactatccatctctataccaaacaaacatcaacaggtaaaagc 1922
Query: 301 agaaacataaccaataggaaaaataaaaagaagcaatgtcgtacccagataattttgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 agaaacataaccaataggaaaaataaaaagaagcaatgtcgtacccagataattttgaag 1982
Query: 361 gttttgcagtagtcgatagccacaaaaaatggttaagtccagaaaaggttgtataccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1983 gttttgcagtagtcgatagccacaaaaaatggttaagtccagaaaaggttgtataccctg 2042
Query: 421 ccaagcaatttaatccaagagatgttgacattgaaattgaggcatgtggtgtttgcggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 ccaagcaatttaatccaagagatgttgacattgaaattgaggcatgtggtgtttgcggta 2102
Query: 481 gtgatgttcactgtgccaagggtaattggggtgaaatgaagttgccgttggttgttgggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 gtgatgttcactgtgccaagggtaattggggtgaaatgaagttgccgttggttgttgggc 2162
Query: 541 atgamatcattggtaaagtggttagacttggtgataagtgtgataccggtttgaaggttg 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 atgaaatcattggtaaagtggttagacttggtgataagtgtgataccggtttgaaggttg 2222
Query: 601 gtgaccgtgttggtgttggtgcacaag-tcagtgcttgtttggactgtmaccgttgtaac 659
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 2223 gtgaccgtgttggtgttggtgcacaagctcagtgcttgtttggactgtaaccgttgtaac 2282
Query: 660 aatgacaacgaacaatactgtccaaaattcgttaccacttactctcaaccatactttgaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 aatgacaacgaacaatactgtccaaaattcgttaccacttactctcaaccatactttgaa 2342
Query: 720 gatggttatgttggtcaaggtggttacgcatctcacatcagagtccacgaacatttcgtg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 gatggttatgttggtcaaggtggttacgcatctcacatcagagtccacgaacatttcgtg 2402
Query: 780 attccaatcccagaatctttagaaaccaacaatgttgcaccattgctatgtggtggtg-c 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2403 attccaatcccagaatctttagaaaccaacaatgttgcaccattgctatgtggtggtgcc 2462
Query: 839 actgtgtattctccattgaagagaaatggatgtggcccaggtaagaaagtcggtatcgtt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2463 actgtgtattctccattgaagagaaatggatgtggcccaggtaagaaagtcggtatcgtt 2522
Query: 899 ggtatcggaggtattggtcacatgggtattctattagccaaagccatgggtgccg-agtg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2523 ggtatcggaggtattggtcacatgggtattctattagccaaagccatgggtgccgaagtg 2582
Query: 958 tacgccatctctagat-ccatgccaaggagg-aamatccaagca 999
|||||||||||||||| |||||||||||||| || |||||||||
Sbjct: 2583 tacgccatctctagatcccatgccaaggaggaaacatccaagca 2626
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7172
Number of Sequences: 1807
Number of extensions: 7172
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)